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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889271.1_cds_XP_016443972.1_39082
CDS Infomation

[gene=LOC107769279] [db_xref=GeneID:107769279] [protein=blue-light photoreceptor PHR2-like] [protein_id=XP_016443972.1] [location=join(69123..70091,71101..71330,71425..71517,71734..71812)] [gbkey=CDS]
Sequence

ATGGATTCCAAGAACCAATCTTCAGACAACCCAGAAAACCAAACACCTCAAGAAGACCAA
CAACTTGTCCCATGTCCACCTCTACCCATAGCCTCCATCTCACTTTCTCTCTCTACAATT
CTCCCCACCCACTTCCTTATTCCTCCCAAAATCTCCTCCACCCTTTTCAGACCCAACAAA
GTTAAAATCCCAACCCAAATTTCATCTCTTTCGAATCTTTCTCTTTCAGCTTCAGCTTCC
CTCCCTCCTCCTACAAAATCCAACTTCAAGTCAACCTTCTCCGCGAACCCACTTCAGGAT
TCTCTCACTCTAAACCCACTTCGCCCTTCTGAGCCCTCTAATGCCGCAGGCCTTCGACGA
GCATCCATTGTTTGGTTCCGTAACGATCTCCGTGTCCACGACAACGAGTCCCTCAACGCT
GCCCACAATGAGTCCATGTCTGTTTTACCCGTTTACTGTTTTGACCCGAGAGATTACGGT
AAATCCTCATCTGGGTTTGATAAAACCGGTCCATATCGCGCTAGTTTCCTGATTGAATCC
GTCACTGACCTTAGGAAGAATTTACAGGCAAGAGGGTCTGATCTTGTTGTTAGAATTGGA
AAACCAGAGACTGTGTTGGTTGAATTAGCTAAAGCTGTGGGAGCTGAAGCAGTGTATGCT
CATAGAGAAGTTTCGTATGATGAGGTTAAAGGGGAAGATAAGATTGAGAGTGTAATGAAG
GATGAGGGAGTGGAGGTTAAGTATTTTTGGGGTAGTACATTGTACCATGTTGATGATTTG
CCTTTTAAGTTGGAGGAAATGCCAACGAATTACGGAGGGTTTAGAGAAAAAGTGCAAGGA
TTGGAGGTAAGGAAGACGATCGAGGCATTGGATCAGTTGAGGGGATTGCCTGCCAGAGGT
GATGTGGAAACTGGGGAGATTCCTTCTTTGGTTGATTTGGGCCTCAATCCGAGCACCACC
CTGGGTCAGAATGGAAAACCAGCTGCTAATGCTTCCCTTGTGGGAGGAGAGAATGAAGCA
CTGCAGAGACTCAGAAAATTTGCAGCCGAATGTCAAGCCCAACCAAATAAGGAAAACAAA
GATGGCACTACTGACAGCATATATGGTGCAAACTTTTCTTGCAAAATATCTCCTTGGCTC
GCTATGGGATGTCTCTCTCCTCGTTCCATGTTTGATGAATTGAAAAAGTCCACTTCAAGA
ACGATTTCTGCTGCCTCTAGCCAGAAAGATGGTGGTAGTGGCACTGGACTGAACTGGCTG
ATGTATGAGCTGTTATGGAGGGATTTTTTCAGATTCATCACCAAGAAATATAGTGCTGCA
AAACAAAATAGTGCTGTGCCAGTTACTGCTTGTGTAGGAGCTGCTGCTTGA

Peptide Sequence

PEP ID

XP_016443972.1
PEP Infomation

PREDICTED: blue-light photoreceptor PHR2-like [Nicotiana tabacum]
Sequence

MDSKNQSSDNPENQTPQEDQQLVPCPPLPIASISLSLSTILPTHFLIPPKISSTLFRPNK
VKIPTQISSLSNLSLSASASLPPPTKSNFKSTFSANPLQDSLTLNPLRPSEPSNAAGLRR
ASIVWFRNDLRVHDNESLNAAHNESMSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES
VTDLRKNLQARGSDLVVRIGKPETVLVELAKAVGAEAVYAHREVSYDEVKGEDKIESVMK
DEGVEVKYFWGSTLYHVDDLPFKLEEMPTNYGGFREKVQGLEVRKTIEALDQLRGLPARG
DVETGEIPSLVDLGLNPSTTLGQNGKPAANASLVGGENEALQRLRKFAAECQAQPNKENK
DGTTDSIYGANFSCKISPWLAMGCLSPRSMFDELKKSTSRTISAASSQKDGGSGTGLNWL
MYELLWRDFFRFITKKYSAAKQNSAVPVTACVGAAA

Transcript Sequence

Gene sequence data has not been registered.